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Preprint WatchStrongNovember 1st, 2026

SF3b inhibitors suppress proliferation of nonsmall cell lung cancer cells irrespective of EGFR mutation status

Fukagawa, W.; Horita, Y.; Harada, H.; Mori, M.; Murata, Y.; Ohe, K.

SF3b spliceosome inhibition suppresses non-small cell lung cancer proliferation irrespective of EGFR mutation status, with EGFR intron 2 retention treated as a target engagement marker rather than the mechanism of the growth effect.

Strong contradiction

3 prior failures

Three or more documented clinical failures match this mechanism, or a Phase 3 efficacy failure is on record.

A bioRxiv molecular biology preprint posted on 31 October 2026 reports that the SF3b splicing inhibitors pladienolide B and herboxidiene held proliferation at or near the day 0 cell number in three lung adenocarcinoma lines at concentrations down to 0.01 micromolar, covering both EGFR exon 19 deletion lines and the EGFR wild type line A549, and the authors read EGFR intron 2 retention as a marker of target engagement rather than as the mechanism of the growth effect. A claim that proliferation in non-small cell lung cancer can be suppressed without depending on EGFR kinase activity lands on a target the Claidex graph already records failing three times in the clinic, through an efficacy failure in tak-186-mvc-101-egfr-cd3-cobra-solid-tumors-phase1-2-efficacy-failure, a translational mismatch in fpi-2107-egfr-cmet-nsclc-dosimetry-uptake-failure, and a sponsor termination in bg-60366-egfr-cdac-nsclc-strategic-shutdown. The authors state that these are single experiments without replicates or statistical testing and should be read as preliminary, which is the correct reading and is why this flag records attention rather than evidence. The combination to watch is a mechanism-agnostic antiproliferative claim against a target whose clinical record already contains a translational mismatch, because that is the pattern under which in vitro potency has previously failed to carry into patients.

Abstract excerpt

Epidermal growth factor receptor tyrosine kinase inhibitors (EGFR-TKIs) are standard care for EGFR-mutant non-small cell lung cancer (NSCLC), but acquired resistance limits their durability, and alternatives that do not depend on EGFR kinase activity are needed. We asked whether inhibitors of SF3b, a core component of the U2 small nuclear ribonucleoprotein particle, act on NSCLC cells regardless of EGFR genotype. Three lung adenocarcinoma lines were treated with pladienolide B or herboxidiene at 0.01, 0.1 and 1 uM: PC9 and HCC827, both carrying an EGFR exon 19 deletion and both inhibited by gefitinib at nanomolar concentrations, and A549, which is EGFR wild type and gefitinibin sensitive. Proliferation was followed for three days by crystal violet staining, EGFR intron 2 retention was assayed by RTPCR, and EGFR protein was measured by western blotting. Both compounds produced a concentration-dependent increase in the intron 2 retained product in all three lines, and both held proliferation at or near the day 0 cell number in all three, at concentrations down to 0.01 uM. EGFR protein was lost in PC9, reduced in A549, and only partly reduced in HCC827, where a residual band persisted in lanes whose growth was fully suppressed. Since A549 is EGFR wild-type, and published knockdown data show that removing EGFR does not suppress proliferation of wild-type lines, the growth inhibition cannot be attributed to loss of EGFR alone. We read EGFR intron 2 retention as a marker of target engagement rather than as the mechanism of the growth effect. These are the results of single experiments without replicates or statistical testing and should be read as preliminary.

Matching Claidex post-mortems

3 of 3 indexed

This is an automated contradiction flag, not an editorial judgment on the preprint's quality. Flags identify where the preclinical literature and the clinical failure record diverge.